Tax4Fun2: a R-based tool for the rapid prediction of habitat-specific functional profiles and functional redundancy based on 16S rRNA gene marker gene sequences

Wemheuer, FranziskaFranziskaWemheuerTaylor, Jessica A.Jessica A.TaylorDaniel, RolfRolfDanielJohnston, EmmaEmmaJohnstonMeinicke, PeterPeterMeinickeThomas, TorstenTorstenThomasWemheuer, BerndBerndWemheuer2020-04-282020-04-282018https://resolver.sub.uni-goettingen.de/purl?gro-2/64441Assessing the functional capability and redundancy of a microbial community is a major challenge in environmental microbiology. To address this challenge, we developed Tax4Fun2, a R-based tool for the rapid prediction of functional profiles and functional redundancy of prokaryotic communities from 16S rRNA gene sequences. By incorporating user-defined, habitat-specific genomic information, the accuracy and robustness of predicted functional profiles can be substantially enhanced.21enTax4Fun2: a R-based tool for the rapid prediction of habitat-specific functional profiles and functional redundancy based on 16S rRNA gene marker gene sequencespreprint10.1101/490037