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Browsing by Author "Gureyev, Timur"

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Now showing 1 - 6 of 6
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    Accuracy and precision of reconstruction of complex refractive index in near-field single-distance propagation-based phase-contrast tomography
    (Amer Inst Physics, 2013)
    Gureyev, Timur
    ;
    Mohammadi, Sara
    ;
    Nesterets, Yakov
    ;
    Dullin, Christian  
    ;
    Tromba, Giuliana
    We investigate the quantitative accuracy and noise sensitivity of reconstruction of the 3D distribution of complex refractive index, n(r) = 1 - delta(r) + i beta(r), in samples containing materials with different refractive indices using propagation-based phase-contrast computed tomography (PB-CT). Our present study is limited to the case of parallel-beam geometry with monochromatic synchrotron radiation, but can be readily extended to cone-beam CT and partially coherent polychromatic X-rays at least in the case of weakly absorbing samples. We demonstrate that, except for regions near the interfaces between distinct materials, the distribution of imaginary part of the refractive index, beta(r), can be accurately reconstructed from a single projection image per view angle using phase retrieval based on the so-called homogeneous version of the Transport of Intensity equation (TIE-Hom) in combination with conventional CT reconstruction. In contrast, the accuracy of reconstruction of delta(r) depends strongly on the choice of the "regularization" parameter in TIE-Hom. We demonstrate by means of an instructive example that for some multi-material samples, a direct application of the TIE-Hom method in PB-CT produces qualitatively incorrect results for delta(r), which can be rectified either by collecting additional projection images at each view angle, or by utilising suitable a priori information about the sample. As a separate observation, we also show that, in agreement with previous reports, it is possible to significantly improve signal-to-noise ratio by increasing the sample-to-detector distance in combination with TIE-Hom phase retrieval in PB-CT compared to conventional ("contact") CT, with the maximum achievable gain of the order of 0.3 delta/beta. This can lead to improved image quality and/or reduction of the X-ray dose delivered to patients in medical imaging. (C) 2013 AIP Publishing LLC.
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    Clinical application of low-dose phase contrast breast CT: methods for the optimization of the reconstruction workflow
    (Optical Soc Amer, 2015)
    Pacile, S.
    ;
    Brun, F.
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    Dullin, Christian  
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    Nesterest, Y. I.
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    Dreossi, D.
    ;
    Mohammadi, S.
    ;
    Tonutti, M.
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    Stacul, F.
    ;
    Lockie, D.
    ;
    Zanconati, F.
    ;
    Accardo, A.
    ;
    Tromba, Giuliana
    ;
    Gureyev, Timur
    Results are presented of a feasibility study of three-dimensional X-ray tomographic mammography utilising in-line phase contrast. Experiments were performed at SYRMEP beamline of Elettra synchrotron. A specially designed plastic phantom and a mastectomy sample containing a malignant lesion were used to study the reconstructed image quality as a function of different image processing operations. Detailed evaluation and optimization of image reconstruction workflows have been carried out using combinations of several advanced computed tomography algorithms with different pre-processing and post-processing steps. Special attention was paid to the effect of phase retrieval on the diagnostic value of the reconstructed images. A number of objective image quality indices have been applied for quantitative evaluation of the results, and these were compared with subjective assessments of the same images by three experienced radiologists and one pathologist. The outcomes of this study provide practical guidelines for the optimization of image processing workflows in synchrotron-based phase-contrast mammo-tomography. (C) 2015 Optical Society of America
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    High-Resolution X-Ray Phase-Contrast 3-D Imaging of Breast Tissue Specimens as a Possible Adjunct to Histopathology
    (2018)
    Baran, Patrycja
    ;
    Mayo, Sheridan
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    McCormack, Mikkaela
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    Pacile, Serena
    ;
    Tromba, Giuliana
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    Dullin, Christian  
    ;
    Zanconati, Fabrizio
    ;
    Arfelli, Fulvia
    ;
    Dreossi, Diego
    ;
    Fox, Jane
    ;
    Prodanovic, Zdenka
    ;
    Cholewa, Marian
    ;
    Quiney, Harry
    ;
    Dimmock, Matthew
    ;
    Nesterets, Yakov
    ;
    Thompson, Darren
    ;
    Brennan, Patrick
    ;
    Gureyev, Timur
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    Investigation of the imaging quality of synchrotron-based phase-contrast mammographic tomography
    (Iop Publishing Ltd, 2014)
    Gureyev, Timur
    ;
    Mayo, S. C.
    ;
    Nesterets, Ya I.
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    Mohammadi, S.
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    Lockie, D.
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    Menk, R. H.
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    Arfelli, F.
    ;
    Pavlov, K. M.
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    Kitchen, M. J.
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    Zanconati, F.
    ;
    Dullin, Christian  
    ;
    Tromba, Giuliana
    We report the results of a systematic study of phase-contrast x-ray computed tomography in the propagation-based and analyser-based modes using specially designed phantoms and excised breast tissue samples. The study is aimed at the quantitative evaluation and subsequent optimization, with respect to detection of small tumours in breast tissue, of the effects of phase contrast and phase retrieval on key imaging parameters, such as spatial resolution, contrast-to-noise ratio, x-ray dose and a recently proposed 'intrinsic quality' characteristic which combines the image noise with the spatial resolution. We demonstrate that some of the methods evaluated in this work lead to substantial (more than 20-fold) improvement in the contrast-to-noise and intrinsic quality of the reconstructed tomographic images compared with conventional techniques, with the measured characteristics being in good agreement with the corresponding theoretical estimations. This improvement also corresponds to an approximately 400-fold reduction in the x-ray dose, compared with conventional absorption-based tomography, without a loss in the imaging quality. The results of this study confirm and quantify the significant potential benefits achievable in three-dimensional mammography using x-ray phase-contrast imaging and phase-retrieval techniques.
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    Optimization of propagation-based x-ray phase-contrast tomography for breast cancer imaging
    (Iop Publishing Ltd, 2017)
    Baran, P.
    ;
    Pacile, S.
    ;
    Nesterets, Y. I.
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    Mayo, S. C.
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    Dullin, Christian  
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    Dreossi, D.
    ;
    Arfelli, F.
    ;
    Thompson, David N.
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    Lockie, D.
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    McCormack, M. Luke
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    Taba, S. T.
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    Brun, F.
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    Pinamonti, M.
    ;
    Nickson, C.
    ;
    Hall, C.
    ;
    Dimmock, M.
    ;
    Zanconati, F.
    ;
    Cholewa, M.
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    Quiney, H.
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    Brennan, P. C.
    ;
    Tromba, Giuliana
    ;
    Gureyev, Timur
    The aim of this study was to optimise the experimental protocol and data analysis for in-vivo breast cancer x-ray imaging. Results are presented of the experiment at the SYRMEP beamline of Elettra Synchrotron using the propagation-based phase-contrast mammographic tomography method, which incorporates not only absorption, but also x-ray phase information. In this study the images of breast tissue samples, of a size corresponding to a full human breast, with radiologically acceptable x-ray doses were obtained, and the degree of improvement of the image quality (from the diagnostic point of view) achievable using propagation-based phase-contrast image acquisition protocols with proper incorporation of x-ray phase retrieval into the reconstruction pipeline was investigated. Parameters such as the x-ray energy, sample-to-detector distance and data processing methods were tested, evaluated and optimized with respect to the estimated diagnostic value using a mastectomy sample with a malignant lesion. The results of quantitative evaluation of images were obtained by means of radiological assessment carried out by 13 experienced specialists. A comparative analysis was performed between the x-ray and the histological images of the specimen. The results of the analysis indicate that, within the investigated range of parameters, both the objective image quality characteristics and the subjective radiological scores of propagation-based phase-contrast images of breast tissues monotonically increase with the strength of phase contrast which in turn is directly proportional to the product of the radiation wavelength and the sample-to-detector distance. The outcomes of this study serve to define the practical imaging conditions and the CT reconstruction procedures appropriate for low-dose phase-contrast mammographic imaging of live patients at specially designed synchrotron beamlines.
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    Towards clinic-friendly solutions for patient trials in breast cancer phase contrast imaging
    (SPIE, 2018)
    Hausermann, Daniel
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    Peele, Andrew
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    Lewis, Sarah J.
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    Brennan, Patrick C.
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    Taba, Seyedamir
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    Gureyev, Timur
    ;
    Tromba, Giuliana
    ;
    Baran, Patrycja
    ;
    Pacile, Serena
    ;
    Dullin, Christian
    ;
    Lockie, Darren
    ;
    Krupinski, Elizabeth A.

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