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Browsing by Author "Gessler, Arthur"

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Now showing 1 - 17 of 17
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    A multi-species synthesis of physiological mechanisms in drought-induced tree mortality
    (2017-09)
    Adams, Henry D.
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    Zeppel, Melanie J. B.
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    Anderegg, William R. L.
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    Hartmann, Henrik  
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    Landhäusser, Simon M.
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    Tissue, David T.
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    Huxman, Travis E.
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    Hudson, Patrick J.
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    Franz, Trenton E.
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    Allen, Craig D.
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    Anderegg, Leander D. L.
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    Barron-Gafford, Greg A.
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    Beerling, David J.
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    Breshears, David D.
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    Brodribb, Timothy J.
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    Bugmann, Harald
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    Cobb, Richard C.
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    Collins, Adam D.
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    Dickman, L. Turin
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    Duan, Honglang
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    Ewers, Brent E.
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    Galiano, Lucía
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    Galvez, David A.
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    Garcia-Forner, Núria
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    Gaylord, Monica L.
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    Germino, Matthew J.
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    Gessler, Arthur
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    Hacke, Uwe G.
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    Hakamada, Rodrigo
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    Hector, Andy
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    Jenkins, Michael W.
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    Kane, Jeffrey M.
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    Kolb, Thomas E.
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    Law, Darin J.
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    Lewis, James D.
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    Limousin, Jean-Marc
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    Love, David M.
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    Macalady, Alison K.
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    Martínez-Vilalta, Jordi
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    Mencuccini, Maurizio
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    Mitchell, Patrick J.
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    Muss, Jordan D.
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    O’Brien, Michael J.
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    O’Grady, Anthony P.
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    Pangle, Robert E.
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    Pinkard, Elizabeth A.
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    Piper, Frida I.
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    Plaut, Jennifer A.
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    Pockman, William T.
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    Quirk, Joe
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    Reinhardt, Keith
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    Ripullone, Francesco
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    Ryan, Michael G.
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    Sala, Anna
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    Sevanto, Sanna
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    Sperry, John S.
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    Vargas, Rodrigo
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    Vennetier, Michel
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    Way, Danielle A.
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    Xu, Chonggang
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    Yepez, Enrico A.
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    McDowell, Nate G.
    Widespread tree mortality associated with drought has been observed on all forested continents and global change is expected to exacerbate vegetation vulnerability. Forest mortality has implications for future biosphere-atmosphere interactions of carbon, water and energy balance, and is poorly represented in dynamic vegetation models. Reducing uncertainty requires improved mortality projections founded on robust physiological processes. However, the proposed mechanisms of drought-induced mortality, including hydraulic failure and carbon starvation, are unresolved. A growing number of empirical studies have investigated these mechanisms, but data have not been consistently analysed across species and biomes using a standardized physiological framework. Here, we show that xylem hydraulic failure was ubiquitous across multiple tree taxa at drought-induced mortality. All species assessed had 60% or higher loss of xylem hydraulic conductivity, consistent with proposed theoretical and modelled survival thresholds. We found diverse responses in non-structural carbohydrate reserves at mortality, indicating that evidence supporting carbon starvation was not universal. Reduced non-structural carbohydrates were more common for gymnosperms than angiosperms, associated with xylem hydraulic vulnerability, and may have a role in reducing hydraulic function. Our finding that hydraulic failure at drought-induced mortality was persistent across species indicates that substantial improvement in vegetation modelling can be achieved using thresholds in hydraulic function.
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    Above and below ground carbohydrate allocation differs between ash (Fraxinus excelsior L.) and beech (Fagus sylvatica L.)
    (2017)
    Thoms, Ronny
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    Köhler, Michael  
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    Gessler, Arthur
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    Gleixner, Gerd
    We investigated soluble carbohydrate transport in trees that differed in their phloem loading strategies in order to better understand the transport of photosynthetic products into the roots and the rhizosphere as this knowledge is needed to better understand the respiratory processes in the rhizosphere. We compared beech, which is suggested to use mainly passive loading of transport sugars along a concentration gradient into the phloem, with ash that uses active loading and polymer trapping of raffinose family oligosaccharides (RFOs). We pulse-labeled 20 four-year old European beech and 20 four-year old ash trees with 13CO2 and tracked the fate of the label within different plant compartments. We extracted soluble carbohydrates from leaves, bark of stems and branches, and fine roots, measured their amount and isotopic content and calculated their turnover times. In beech one part of the sucrose was rapidly transported into sink tissues without major exchange with storage pools whereas another part of sucrose was strongly exchanged with unlabeled possibly stored sucrose. In contrast the storage and allocation patterns in ash depended on the identity of the transported sugars. RFO were the most important transport sugars that had highest turnover in all shoot compartments. However, the turnover of RFOs in the roots was uncoupled from the shoot. The only significant relation between sugars in the stem base and in the roots of ash was found for the amount (r2 = 0.50; p = 0.001) and isotopic content (r2 = 0.47; p = 0.01) of sucrose. The negative relation of the amounts suggested an active transport of sucrose into the roots of ash. Sucrose concentration in the root also best explained the concentration of RFOs in the roots suggesting that RFO in the roots of ash may be resynthesized from sucrose. Our results interestingly suggest that in both tree species only sucrose directly entered the fine root system and that in ash RFOs are transported indirectly into the fine roots only. The direct transport of sucrose might be passive in beech but active in ash (sustained active up- and unloading to co-cells), which would correspond to the phloem loading strategies. Our results give first hints that the transport of carbohydrates between shoot and root is not necessarily continuous and involves passive (beech) and active (ash) transport processes, which may be controlled by the phloem unloading.
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    Below-ground resource partitioning alone cannot explain the biodiversity-ecosystem function relationship: A field test using multiple tracers
    (2018)
    Jesch, Annette
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    Barry, Kathryn E.
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    Ravenek, Janneke M.
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    Bachmann, Dörte
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    Strecker, Tanja  
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    Weigelt, Alexandra
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    Buchmann, Nina
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    de Kroon, Hans
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    Gessler, Arthur
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    Mommer, Liesje
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    Roscher, Christiane
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    Scherer-Lorenzen, Michael
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    Hector, Andy
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    Biodiversity effects on ecosystem functioning in a 15-year grassland experiment: Patterns, mechanisms, and open questions
    (2017)
    Weisser, Wolfgang W.
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    Roscher, Christiane
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    Meyer, Sebastian T.
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    Ebeling, Anne
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    Luo, Guangjuan
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    Allan, Eric
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    Beßler, Holger
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    Barnard, Romain L.
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    Buchmann, Nina
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    Buscot, François
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    Engels, Christof
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    Fischer, Christine
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    Fischer, Markus
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    Gessler, Arthur
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    Gleixner, Gerd
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    Halle, Stefan
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    Hildebrandt, Anke  
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    Hillebrand, Helmut
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    de Kroon, Hans
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    Huber-Lang, Markus S.
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    Leimer, Sophia
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    Le Roux, Xavier
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    Milcu, Alexandru
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    Mommer, Liesje
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    Niklaus, Pascal A.
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    Oelmann, Yvonne
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    Proulx, Raphael
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    Roy, Jacques
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    Scherber, Christoph  
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    Scherer-Lorenzen, Michael
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    Scheu, Stefan  
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    Tscharntke, Teja  
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    Wachendorf, Michael  
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    Wagg, Cameron
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    Weigelt, Alexandra
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    Wilcke, Wolfgang
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    Wirth, Christian
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    Schulze, Ernst-Detlef
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    Schmid, Bernhard
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    Eisenhauer, Nico  
    In the past two decades, a large number of studies have investigated the relationship between biodiversity and ecosystem functioning, most of which focussed on a limited set of ecosystem variables. The Jena Experiment was set up in 2002 to investigate the effects of plant diversity on element cycling and trophic interactions, using a multi-disciplinary approach. Here, we review the results of 15 years of research in the Jena Experiment, focussing on the effects of manipulating plant species richness and plant functional richness. With more than 85,000 measures taken from the plant diversity plots, the Jena Experiment has allowed answering fundamental questions important for functional biodiversity research.
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    Carbon and nitrogen balance in beech roots under competitive pressure of soil-borne microorganisms induced by girdling, drought and glucose application
    (2010)
    Winkler, Jana B.
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    Dannenmann, Michael
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    Simon, Judy
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    Pena, Rodica  
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    Offermann, Christine
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    Sternad, Wolfgang
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    Clemenz, Christian
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    Naumann, Pascale Sarah
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    Gasche, Rainer
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    Kögel-Knabner, Ingrid
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    Gessler, Arthur
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    Rennenberg, Heinz
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    Polle, Andrea  
    The goal of this work was to increase the understanding of factors regulating nitrogen (N) competition between roots and soil microbes. For this purpose, root assimilate supply was diminished or abolished in beech (Fagus sylvatica L.) seedlings by girdling, drought stress or a combination of both factors. This was revealed by 13C tracer abundance in root tips after 13CO2 pulse labelling of the shoots. Analysis of different root tip fractions revealed that only 6% were ectomycorrhizal. Carbon (C) allocation to ectomycorrhizal and vital non-mycorrhizal root tips was ~26% higher than to distorted root tips. Drought resulted in ~30% increased ammonium (NH4+) and amino acid concentrations in roots and ~65% increased soil NH4+ concentrations, probably because of lower consumption of NH4+ by free-living microorganisms. Root uptake of glutamine of 13 nmol g–1 fresh mass h–1 decreased 2-fold with drought, although the number of vital root tips did not decrease. Carbon content in biomass of free-living microbes increased with glucose application regardless of drought, resulting in significant depletion in soil nitrate (NO3–), root NH4+ and amino acid concentrations. Our results suggest that the root–soil system of young beech trees was C-limited, and this prevented amino acid metabolism in roots and microbial NO3– consumption in the soil, thereby exerting feedback inhibition on uptake of inorganic N by roots. We suggest that rhizodeposition is a key link in regulating the plant–microbial N balance.
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    Functional composition has stronger impact than species richness on carbon gain and allocation in experimental grasslands
    (2019)
    Roscher, Christiane
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    Karlowsky, Stefan
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    Milcu, Alexandru
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    Gessler, Arthur
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    Bachmann, Dörte
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    Jesch, Annette
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    Lange, Markus
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    Mellado-Vázquez, Perla
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    Strecker, Tanja  
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    Landais, Damien
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    Ravel, Olivier
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    Buchmann, Nina
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    Roy, Jacques
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    Gleixner, Gerd
    Numerous experiments have shown positive diversity effects on plant productivity, but little is known about related processes of carbon gain and allocation. We investigated these processes in a controlled environment (Montpellier European Ecotron) applying a continuous 13CO2 label for three weeks to 12 soil-vegetation monoliths originating from a grassland biodiversity experiment (Jena Experiment) and representing two diversity levels (4 and 16 sown species). Plant species richness did not affect community- and species-level 13C abundances neither in total biomass nor in non-structural carbohydrates (NSC). Community-level 13C excess tended to be higher in the 16-species than in the 4-species mixtures. Community-level 13C excess was positively related to canopy leaf nitrogen (N), i.e. leaf N per unit soil surface. At the species level, shoot 13C abundances varied among plant functional groups and were larger in legumes and tall herbs than in grasses and small herbs, and correlated positively with traits as leaf N concentrations, stomatal conductance and shoot height. The 13C abundances in NSC were larger in transport sugars (sucrose, raffinose-family oligosaccharides) than in free glucose, fructose and compounds of the storage pool (starch) suggesting that newly assimilated carbon is to a small portion allocated to storage. Our results emphasize that the functional composition of communities is key in explaining carbon assimilation in grasslands.
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    Genotypic variability enhances the reproducibility of an ecological study
    (2018)
    Milcu, Alexandru
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    Puga-Freitas, Ruben
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    Ellison, Aaron M.
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    Blouin, Manuel
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    Scheu, Stefan  
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    Freschet, Grégoire T.
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    Rose, Laura
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    Barot, Sebastien
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    Cesarz, Simone  
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    Eisenhauer, Nico  
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    Girin, Thomas
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    Assandri, Davide
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    Bonkowski, Michael
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    Buchmann, Nina
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    Butenschoen, Olaf  
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    Devidal, Sebastien
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    Gleixner, Gerd
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    Gessler, Arthur
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    Gigon, Agnès
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    Greiner, Anna
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    Grignani, Carlo
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    Hansart, Amandine
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    Kayler, Zachary
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    Lange, Markus
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    Lata, Jean-Christophe
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    Le Galliard, Jean-François
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    Lukac, Martin
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    Mannerheim, Neringa
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    Müller, Marina E. H.
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    Pando, Anne
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    Rotter, Paula
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    Scherer-Lorenzen, Michael
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    Seyhun, Rahme
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    Urban-Mead, Katherine
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    Weigelt, Alexandra
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    Zavattaro, Laura
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    Roy, Jacques
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    Integrating Aquatic and Terrestrial Perspectives to Improve Insights Into Organic Matter Cycling at the Landscape Scale
    (2019)
    Kayler, Zachary E.
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    Premke, Katrin
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    Gessler, Arthur
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    Gessner, Mark O.
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    Griebler, Christian
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    Hilt, Sabine
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    Klemedtsson, Leif
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    Kuzyakov, Yakov  
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    Reichstein, Markus
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    Siemens, Jan
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    Totsche, Kai-Uwe
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    Tranvik, Lars
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    Wagner, Annekatrin
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    Weitere, Markus
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    Grossart, Hans-Peter
    Across a landscape, aquatic-terrestrial interfaces within and between ecosystems are hotspots of organic matter (OM) mineralization. These interfaces are characterized by sharp spatio-temporal changes in environmental conditions, which affect OM properties and thus control OM mineralization and other transformation processes. Consequently, the extent of OM movement at and across aquatic-terrestrial interfaces is crucial in determining OM turnover and carbon (C) cycling at the landscape scale. Here, we propose expanding current concepts in aquatic and terrestrial ecosystem sciences to comprehensively evaluate OM turnover at the landscape scale. We focus on three main concepts toward explaining OM turnover at the landscape scale: the landscape spatiotemporal context, OM turnover described by priming and ecological stoichiometry, and anthropogenic effects as a disruptor of natural OM transfer magnitudes and pathways. A conceptual framework is introduced that allows for discussing the disparities in spatial and temporal scales of OM transfer, changes in environmental conditions, ecosystem connectivity, and microbial–substrate interactions. The potential relevance of priming effects in both terrestrial and aquatic systems is addressed. For terrestrial systems, we hypothesize that the interplay between the influx of OM, its corresponding elemental composition, and the elemental demand of the microbial communities may alleviate spatial and metabolic thresholds. In comparison, substrate level OM dynamics may be substantially different in aquatic systems due to matrix effects that accentuate the role of abiotic conditions, substrate quality, and microbial community dynamics. We highlight the disproportionate impact anthropogenic activities can have on OM cycling across the landscape. This includes reversing natural OM flows through the landscape, disrupting ecosystem connectivity, and nutrient additions that cascade across the landscape. This knowledge is crucial for a better understanding of OM cycling in a landscape context, in particular since terrestrial and aquatic compartments may respond differently to the ongoing changes in climate, land use, and other anthropogenic interferences.
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    Interaction of nitrogen nutrition and salinity in Grey poplar (Populus tremula x alba)
    (2007)
    Ehlting, Barbara
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    Dluzniewska, P.
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    Dietrich, Henriette
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    Selle, Anita
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    Teuber, Markus
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    Hänsch, Robert
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    Nehls, Uwe
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    Polle, Andrea  
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    Schnitzler, Jörg-Peter
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    Rennenberg, Heinz
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    Gessler, Arthur
    Salinity represents an increasing environmental problem in managed ecosystems. Populus spp. is widely used for wood production by short‐rotation forestry in fertilized plantations and can be grown on saline soil. Because N fertilization plays an important role in salt tolerance, we analysed Grey poplar (Populus tremula × alba, syn. Populus canescens) grown with either 1 mM nitrate or ammonium subjected to moderate 75 mM NaCl. The impact of N nutrition on amelioration of salt tolerance was analysed on different levels of N metabolism such as N uptake, assimilation and N (total N, proteins and amino compounds) accumulation. Na concentration increased in all tissues over time of salt exposure. The N nutrition‐dependent effects of salt exposure were more intensive in roots than in leaves. Application of salt reduced root increment as well as stem height increase and, at the same time, increased the concentration of total amino compounds more intensively in roots of ammonium‐fed plants. In leaves, salt treatment increased concentrations of total N more intensively in nitrate‐fed plants and concentrations of amino compounds independently of N nutrition. The major changes in N metabolism of Grey poplar exposed to moderate salt concentrations were detected in the significant increase of amino acid concentrations. The present results indicate that N metabolism of Grey poplar exposed to salt performed better when the plants were fed with nitrate instead of ammonium as sole N source. Therefore, nitrate fertilization of poplar plantations grown on saline soil should be preferred.
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    Ischiopagus Tripus Conjoined Twins in a Western Lowland Gorilla (Gorilla gorilla)
    (2014)
    Langer, S.
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    Jurczynski, K.
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    Gessler, Arthur
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    Kaune, Kjell Matthias
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    Bleyer, Martina
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    Maetz-Rensing, Kerstin
    Conjoined twinning is rare in man and non-human primates. The current report describes a case of ischiopagus tripus conjoined Western Lowland gorilla (Gorilla gorilla) twins. The female twins were joined at the umbilical and pelvic region, involving the liver, xiphoid, umbilicus, body wall and skin. Computed tomography revealed two complete spines. The combined pelvic space was formed by two sacra, each connected with two iliac bones. The twins were only conjoined by a common pubis. Cause of death was attributed to cardiac and circulatory collapse resulting from a large patent foramen ovale (8 mm in diameter) of one twin and neonatal asphyxia. (C) 2013 Elsevier Ltd. All rights reserved.
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    Nitrogen nutrition of beech forests in a changing climate: importance of plant-soil-microbe water, carbon, and nitrogen interactions
    (2017)
    Simon, Judy
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    Dannenmann, Michael
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    Pena, Rodica  
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    Gessler, Arthur
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    Rennenberg, Heinz
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    Plant diversity shapes microbe-rhizosphere effects on P mobilisation from organic matter in soil
    (Wiley-blackwell, 2015)
    Hacker, Nina
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    Ebeling, Anne
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    Gessler, Arthur
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    Gleixner, Gerd
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    Mace, Odette Gonzalez
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    de Kroon, Hans
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    Lange, Markus
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    Mommer, Liesje
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    Eisenhauer, Nico  
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    Ravenek, Janneke M.
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    Scheu, Stefan  
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    Weigelt, Alexandra
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    Wagg, Cameron
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    Wilcke, Wolfgang
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    Oelmann, Yvonne
    Plant species richness (PSR) increases nutrient uptake which depletes bioavailable nutrient pools in soil. No such relationship between plant uptake and availability in soil was found for phosphorus (P). We explored PSR effects on P mobilisation [phosphatase activity (PA)] in soil. PA increased with PSR. The positive PSR effect was not solely due to an increase in C-org concentrations because PSR remained significant if related to PA:C-org. An increase in PA per unit C-org increases the probability of the temporal and spatial match between substrate, enzyme and microorganism potentially serving as an adaption to competition. Carbon use efficiency of microorganisms (C-mic:C-org) increased with increasing PSR while enzyme exudation efficiency (PA:C-mic) remained constant. These findings suggest the need for efficient C rather than P cycling underlying the relationship between PSR and PA. Our results indicate that the coupling between C and P cycling in soil becomes tighter with increasing PSR.
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    Research frontiers for improving our understanding of drought-induced tree and forest mortality
    (2018-04)
    Hartmann, Henrik  
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    Moura, Catarina F.
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    Anderegg, William R. L.
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    Ruehr, Nadine K.
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    Salmon, Yann
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    Allen, Craig D.
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    Arndt, Stefan K.
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    Breshears, David D.
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    Davi, Hendrik
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    Galbraith, David
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    Ruthrof, Katinka X.
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    Wunder, Jan
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    Adams, Henry D.
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    Bloemen, Jasper
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    Cailleret, Maxime
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    Cobb, Richard
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    Gessler, Arthur
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    Grams, Thorsten E. E.
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    Jansen, Steven
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    Kautz, Markus
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    Lloret, Francisco
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    O’Brien, Michael
    Accumulating evidence highlights increased mortality risks for trees during severe drought, particularly under warmer temperatures and increasing vapour pressure deficit (VPD). Resulting forest die-off events have severe consequences for ecosystem services, biophysical and biogeochemical land-atmosphere processes. Despite advances in monitoring, modelling and experimental studies of the causes and consequences of tree death from individual tree to ecosystem and global scale, a general mechanistic understanding and realistic predictions of drought mortality under future climate conditions are still lacking. We update a global tree mortality map and present a roadmap to a more holistic understanding of forest mortality across scales. We highlight priority research frontiers that promote: (1) new avenues for research on key tree ecophysiological responses to drought; (2) scaling from the tree/plot level to the ecosystem and region; (3) improvements of mortality risk predictions based on both empirical and mechanistic insights; and (4) a global monitoring network of forest mortality. In light of recent and anticipated large forest die-off events such a research agenda is timely and needed to achieve scientific understanding for realistic predictions of drought-induced tree mortality. The implementation of a sustainable network will require support by stakeholders and political authorities at the international level.
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    Rhizosphere activity in an old-growth forest reacts rapidly to changes in soil moisture and shapes whole-tree carbon allocation
    (2020-10-06)
    Joseph, Jobin
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    Gao, Decai
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    Backes, Bernhard
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    Bloch, Corinne
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    Brunner, Ivano
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    Gleixner, Gerd
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    Haeni, Matthias
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    Hartmann, Henrik  
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    Hoch, Günter
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    Hug, Christian
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    Kahmen, Ansgar
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    Lehmann, Marco M.
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    Li, Mai-He
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    Luster, Jörg
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    Peter, Martina
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    Poll, Christian
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    Rigling, Andreas
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    Rissanen, Kaisa A.
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    Ruehr, Nadine K.
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    Saurer, Matthias
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    Schaub, Marcus
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    Schönbeck, Leonie
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    Stern, Benjamin
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    Thomas, Frank M.
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    Werner, Roland A.
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    Werner, Willy
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    Wohlgemuth, Thomas
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    Hagedorn, Frank
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    Gessler, Arthur
    Drought alters carbon (C) allocation within trees, thereby impairing tree growth. Recovery of root and leaf functioning and prioritized C supply to sink tissues after drought may compensate for drought-induced reduction of assimilation and growth. It remains unclear if C allocation to sink tissues during and following drought is controlled by altered sink metabolic activities or by the availability of new assimilates. Understanding such mechanisms is required to predict forests' resilience to a changing climate. We investigated the impact of drought and drought release on C allocation in a 100-y-old Scots pine forest. We applied 13CO2 pulse labeling to naturally dry control and long-term irrigated trees and tracked the fate of the label in above- and belowground C pools and fluxes. Allocation of new assimilates belowground was ca. 53% lower under nonirrigated conditions. A short rainfall event, which led to a temporary increase in the soil water content (SWC) in the topsoil, strongly increased the amounts of C transported belowground in the nonirrigated plots to values comparable to those in the irrigated plots. This switch in allocation patterns was congruent with a tipping point at around 15% SWC in the response of the respiratory activity of soil microbes. These results indicate that the metabolic sink activity in the rhizosphere and its modulation by soil moisture can drive C allocation within adult trees and ecosystems. Even a subtle increase in soil moisture can lead to a rapid recovery of belowground functions that in turn affects the direction of C transport in trees.
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    Root chemistry and soil fauna, but not soil abiotic conditions explain the effects of plant diversity on root decomposition
    (2017)
    Chen, Hongmei
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    Oram, Natalie J.
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    Barry, Kathryn E.
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    Mommer, Liesje
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    van Ruijven, Jasper
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    de Kroon, Hans
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    Ebeling, Anne
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    Eisenhauer, Nico  
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    Fischer, Christine
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    Gleixner, Gerd
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    Gessler, Arthur
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    González Macé, Odette
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    Hacker, Nina
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    Hildebrandt, Anke  
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    Lange, Markus
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    Scherer-Lorenzen, Michael
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    Scheu, Stefan  
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    Oelmann, Yvonne
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    Wagg, Cameron
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    Wilcke, Wolfgang
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    Wirth, Christian
    ;
    Weigelt, Alexandra
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    Root traits as drivers of plant and ecosystem functioning: current understanding, pitfalls and future research needs
    (2021)
    Freschet, Grégoire T.
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    Roumet, Catherine
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    Comas, Louise H.
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    Weemstra, Monique
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    Bengough, A. Glyn
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    Rewald, Boris
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    Bardgett, Richard D.
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    De Deyn, Gerlinde B.
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    Johnson, David
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    Klimešová, Jitka
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    Lukac, Martin
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    McCormack, M. Luke
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    Meier, Ina C.  
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    Pagès, Loïc
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    Poorter, Hendrik
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    Prieto, Ivan
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    Wurzburger, Nina
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    Zadworny, Marcin
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    Bagniewska‐Zadworna, Agnieszka
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    Blancaflor, Elison B.
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    Brunner, Ivano
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    Gessler, Arthur
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    Hobbie, Sarah E.
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    Iversen, Colleen M.
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    Mommer, Liesje
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    Picon‐Cochard, Catherine
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    Postma, Johannes A.
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    Rose, Laura
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    Ryser, Peter
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    Scherer‐Lorenzen, Michael
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    Soudzilovskaia, Nadejda A.
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    Sun, Tao
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    Valverde‐Barrantes, Oscar J.
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    Weigelt, Alexandra
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    York, Larry M.
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    Stokes, Alexia
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    The quandary of sources and sinks of CO2 efflux in tree stems—new insights and future directions
    (2024)
    Salomón, Roberto L
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    Helm, Juliane
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    Gessler, Arthur
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    Grams, Thorsten E E
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    Hilman, Boaz
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    Muhr, Jan
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    Steppe, Kathy
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    Wittmann, Christiane
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    Hartmann, Henrik
    Abstract Stem respiration (RS) substantially contributes to the return of photo assimilated carbon to the atmosphere and, thus, to the tree and ecosystem carbon balance. Stem CO2 efflux (ECO2) is often used as a proxy for RS. However, this metric has often been challenged because of the uncertain origin of CO2 emitted from the stem due to post-respiratory processes. In this Insight, we (i) describe processes affecting the quantification of RS, (ii) review common methodological approaches to quantify and model RS and (iii) develop a research agenda to fill the most relevant knowledge gaps that we identified. Dissolution, transport and accumulation of respired CO2 away from its production site, reassimilation of respired CO2 via stem photosynthesis and the enzyme phosphoenolpyruvate carboxylase, axial CO2 diffusion in the gas phase, shifts in the respiratory substrate and non-respiratory oxygen (O2) consumption are the most relevant processes causing divergence between RS and measured stem gas exchange (ECO2 or O2 influx, IO2). Two common methodological approaches to estimate RS, namely the CO2 mass balance approach and the O2 consumption technique, circumvent some of these processes but have yielded inconsistent results regarding the fate of respired CO2. Stem respiration modelling has recently progressed at the organ and tree levels. However, its implementation in large-scale models, commonly operated from a source-driven perspective, is unlikely to reflect adequate mechanisms. Finally, we propose hypotheses and approaches to advance the knowledge of the stem carbon balance, the role of sap pH on RS, the reassimilation of respired CO2, RS upscaling procedures, large-scale RS modelling and shifts in respiratory metabolism during environmental stress.

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