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Browsing by Author "Brenner, Thorsten"

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    Adsorption of nanoparticles at the solid-liquid interface
    (2012-05-15)
    Brenner, Thorsten
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    Paulus, Michael
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    Schroer, Martin A.
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    Tiemeyer, Sebastian
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    Sternemann, Christian
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    Möller, Johannes
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    Tolan, Metin  
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    Degen, Patrick
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    Rehage, Heinz
    The adsorption of differently charged nanoparticles at liquid-solid interfaces was investigated by in situ X-ray reflectivity measurements. The layer formation of positively charged maghemite (γ-Fe(2)O(3)) nanoparticles at the aqueous solution-SiO(2) interface was observed while negatively charged gold nanoparticles show no adsorption at this interface. Thus, the electrostatic interaction between the particles and the charged surface was determined as the driving force for the adsorption process. The data analysis shows that a logarithmic particle size distribution describes the density profile of the thin adsorbed maghemite layer. The size distribution in the nanoparticle solution determined by small angle X-ray scattering shows an average particle size which is similar to that found for the adsorbed film. The formed magehemite film exhibits a rather high stability.
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    Machine learning identifies ICU outcome predictors in a multicenter COVID-19 cohort
    (BioMed Central, 2021-08-17)
    Magunia, Harry
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    Lederer, Simone
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    Verbuecheln, Raphael
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    Gilot, Bryant Joseph
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    Koeppen, Michael
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    Haeberle, Helene A.
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    Mirakaj, Valbona
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    Hofmann, Pascal
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    Marx, Gernot
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    Bickenbach, Johannes
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    Nohe, Boris
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    Lay, Michael
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    Spies, Claudia  
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    Edel, Andreas
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    Schiefenhövel, Fridtjof
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    Rahmel, Tim
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    Putensen, Christian
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    Sellmann, Timur
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    Koch, Thea
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    Brandenburger, Timo
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    Kindgen-Milles, Detlef
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    Brenner, Thorsten
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    Berger, Marc
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    Zacharowski, Kai
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    Adam, Elisabeth
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    Posch, Matthias
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    Moerer, Onnen  
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    Scheer, Christian S.
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    Sedding, Daniel
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    Weigand, Markus A.
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    Fichtner, Falk
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    Nau, Carla
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    Prätsch, Florian
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    Wiesmann, Thomas
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    Koch, Christian
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    Schneider, Gerhard
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    Lahmer, Tobias
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    Straub, Andreas
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    Meiser, Andreas
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    Weiss, Manfred
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    Jungwirth, Bettina
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    Wappler, Frank
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    Meybohm, Patrick
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    Herrmann, Johannes
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    Malek, Nisar
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    Kohlbacher, Oliver
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    Biergans, Stephanie
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    Rosenberger, Peter
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    Magunia, Harry; Department of Anesthesiology and Intensive Care Medicine, University Hospital Tübingen, Eberhard-Karls-University Tübingen, Tübingen, Germany
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    Lederer, Simone; Institute for Translational Bioinformatics and Medical Data Integration Center, University Hospital Tübingen, Eberhard-Karls-University Tübingen, Tübingen, Germany
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    Verbuecheln, Raphael; Institute for Translational Bioinformatics and Medical Data Integration Center, University Hospital Tübingen, Eberhard-Karls-University Tübingen, Tübingen, Germany
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    Gilot, Bryant Joseph; Institute for Translational Bioinformatics and Medical Data Integration Center, University Hospital Tübingen, Eberhard-Karls-University Tübingen, Tübingen, Germany
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    Koeppen, Michael; Department of Anesthesiology and Intensive Care Medicine, University Hospital Tübingen, Eberhard-Karls-University Tübingen, Tübingen, Germany
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    Haeberle, Helene A.; Department of Anesthesiology and Intensive Care Medicine, University Hospital Tübingen, Eberhard-Karls-University Tübingen, Tübingen, Germany
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    Mirakaj, Valbona; Department of Anesthesiology and Intensive Care Medicine, University Hospital Tübingen, Eberhard-Karls-University Tübingen, Tübingen, Germany
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    Hofmann, Pascal; Department of Anesthesiology and Intensive Care Medicine, University Hospital Tübingen, Eberhard-Karls-University Tübingen, Tübingen, Germany
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    Marx, Gernot; Department of Intensive Care Medicine, University Hospital RWTH Aachen, Aachen, Germany
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    Bickenbach, Johannes; Department of Intensive Care Medicine, University Hospital RWTH Aachen, Aachen, Germany
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    Nohe, Boris; Center for Anaesthesia, Intensive Care and Emergency Medicine, Zollernalb Klinikum, Balingen, Germany
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    Lay, Michael; Center for Anaesthesia, Intensive Care and Emergency Medicine, Zollernalb Klinikum, Balingen, Germany
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    Spies, Claudia; Department of Anesthesiology and Operative Intensive Care Medicine (CCM, CVK), Charité - Universitätsmedizin Berlin, Corporate Member of Freie Universität Berlin, Berlin Institute of Health, Humboldt-Universität zu Berlin, Berlin
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    Edel, Andreas; Department of Anesthesiology and Operative Intensive Care Medicine (CCM, CVK), Charité - Universitätsmedizin Berlin, Corporate Member of Freie Universität Berlin, Berlin Institute of Health, Humboldt-Universität zu Berlin, Berlin
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    Schiefenhövel, Fridtjof; Institute of Medical Informatics, Charité – Universitätsmedizin Berlin, Corporate Member of Freie Universität Berlin, Berlin Institute of Health, Humboldt-Universität Zu Berlin, Berlin, Germany
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    Rahmel, Tim; Department of Anesthesiology, Intensive Care Medicine/Pain Therapy, Bochum, Germany
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    Putensen, Christian; Department of Anaesthesiology and Intensive Care Medicine, University Hospital Bonn, Bonn, Germany
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    Sellmann, Timur; Chair of Anesthesiology 1, Witten/Herdecke University, Wuppertal, Germany
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    Koch, Thea; Department of Anesthesiology and Intensive Care Medicine, University Hospital Carl Gustav Carus, Technische Universität Dresden, Dresden, Germany
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    Brandenburger, Timo; Department of Anaesthesiology, University Hospital Düsseldorf, Düsseldorf, Germany
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    Kindgen-Milles, Detlef; Department of Anaesthesiology, University Hospital Düsseldorf, Düsseldorf, Germany
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    Brenner, Thorsten; Department of Anesthesiology and Intensive Care Medicine, University Hospital Essen, University Duisburg-Essen, Essen, Germany
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    Berger, Marc; Department of Anesthesiology and Intensive Care Medicine, University Hospital Essen, University Duisburg-Essen, Essen, Germany
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    Zacharowski, Kai; Department of Anaesthesiology, Intensive Care Medicine and Pain Therapy, University Hospital Frankfurt, Goethe University, Frankfurt, Germany
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    Adam, Elisabeth; Department of Anaesthesiology, Intensive Care Medicine and Pain Therapy, University Hospital Frankfurt, Goethe University, Frankfurt, Germany
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    Posch, Matthias; Department of Anesthesiology and Critical Care, Medical Center - University of Freiburg, Freiburg, Germany
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    Moerer, Onnen; Center for Anesthesiology, Emergency and Intensive Care Medicine, University of Göttingen, Göttingen, Germany
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    Scheer, Christian S.; Department of Anesthesiology, University Medicine Greifswald, Greifswald, Germany
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    Sedding, Daniel; Department Cardiology, Angiology and Intensive Care Medicine, University Hospital Halle (Saale), Halle (Saale), Germany
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    Weigand, Markus A.; Department of Anesthesiology, Heidelberg University Hospital, Heidelberg, Germany
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    Fichtner, Falk; Department of Anesthesiology and Intensive Care, Leipzig University Hospital, Leipzig, Germany
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    Nau, Carla; Department of Anesthesiology and Intensive Care, University Medical Center Schleswig-Holstein, Campus Lübeck, University of Lübeck, Lübeck, Germany
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    Prätsch, Florian; Department of Anaesthesiology and Intensive Care Therapy, Otto-Von-Guericke-University Magdeburg, Magdeburg, Germany
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    Wiesmann, Thomas; University Hospital Marburg, UKGM, Philipps University Marburg, Marburg, Germany
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    Koch, Christian; Department of Anesthesiology, Intensive Care Medicine and Pain Therapy, University Hospital Giessen and Marburg, Justus-Liebig University Giessen, Giessen, Germany
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    Schneider, Gerhard; Department of Anesthesiology and Intensive Care, School of Medicine, Klinikum Rechts Der Isar, Technical University of Munich, Munich, Germany
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    Lahmer, Tobias; Klinik Und Poliklinik Für Innere Medizin II, Klinikum Rechts Der Isar der, Technischen Universität München, Munich, Germany
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    Straub, Andreas; Department for Anesthesiology, Intensive Care Medicine, Emergency Medicine and Pain Medicine, St. Elisabethen Klinikum, Ravensburg, Germany
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    Meiser, Andreas; Department of Anesthesiology, Intensive Care Medicine and Pain Medicine, Saarland University Hospital Medical Center, Homburg/Saar, Germany
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    Weiss, Manfred; Department of Anesthesiology and Intensive Care Medicine, Ulm University, Ulm, Germany
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    Jungwirth, Bettina; Department of Anesthesiology and Intensive Care Medicine, Ulm University, Ulm, Germany
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    Wappler, Frank; Department of Anaesthesiology and Intensive Care Medicine, Cologne-Merheim Medical Centre, Witten/Herdecke University, Cologne-Merheim, Germany
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    Meybohm, Patrick; Department of Anaesthesiology, Intensive Care, Emergency and Pain Medicine, University Hospital Wuerzburg, University Wuerzburg, Wuerzburg, Germany
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    Herrmann, Johannes; Department of Anaesthesiology, Intensive Care, Emergency and Pain Medicine, University Hospital Wuerzburg, University Wuerzburg, Wuerzburg, Germany
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    Malek, Nisar; Department of Internal Medicine 1, University Hospital Tübingen, Tübingen, Germany
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    Kohlbacher, Oliver; Department of Computer Science, Institute for Bioinformatics and Medical Informatics, University of Tübingen, Tübingen, Germany
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    Biergans, Stephanie; Institute for Translational Bioinformatics and Medical Data Integration Center, University Hospital Tübingen, Eberhard-Karls-University Tübingen, Tübingen, Germany
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    Rosenberger, Peter; Department of Anesthesiology and Intensive Care Medicine, University Hospital Tübingen, Eberhard-Karls-University Tübingen, Tübingen, Germany
    Abstract Background Intensive Care Resources are heavily utilized during the COVID-19 pandemic. However, risk stratification and prediction of SARS-CoV-2 patient clinical outcomes upon ICU admission remain inadequate. This study aimed to develop a machine learning model, based on retrospective & prospective clinical data, to stratify patient risk and predict ICU survival and outcomes. Methods A Germany-wide electronic registry was established to pseudonymously collect admission, therapeutic and discharge information of SARS-CoV-2 ICU patients retrospectively and prospectively. Machine learning approaches were evaluated for the accuracy and interpretability of predictions. The Explainable Boosting Machine approach was selected as the most suitable method. Individual, non-linear shape functions for predictive parameters and parameter interactions are reported. Results 1039 patients were included in the Explainable Boosting Machine model, 596 patients retrospectively collected, and 443 patients prospectively collected. The model for prediction of general ICU outcome was shown to be more reliable to predict “survival”. Age, inflammatory and thrombotic activity, and severity of ARDS at ICU admission were shown to be predictive of ICU survival. Patients’ age, pulmonary dysfunction and transfer from an external institution were predictors for ECMO therapy. The interaction of patient age with D-dimer levels on admission and creatinine levels with SOFA score without GCS were predictors for renal replacement therapy. Conclusions Using Explainable Boosting Machine analysis, we confirmed and weighed previously reported and identified novel predictors for outcome in critically ill COVID-19 patients. Using this strategy, predictive modeling of COVID-19 ICU patient outcomes can be performed overcoming the limitations of linear regression models. Trial registration “ClinicalTrials” (clinicaltrials.gov) under NCT04455451.
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    Sticking polydisperse hydrophobic magnetite nanoparticles to lipid membranes
    (2010-10-19)
    Paulus, Michael
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    Degen, Patrick
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    Brenner, Thorsten
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    Tiemeyer, Sebastian
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    Struth, Bernd
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    Tolan, Metin  
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    Rehage, Heinz
    The formation of a layer of hydrophobic magnetite (Fe(3)O(4)) nanoparticles stabilized by lauric acid is analyzed by in situ X-ray reflectivity measurements. The data analysis shows that the nanoparticles partially disperse their hydrophobic coating. Consequently, a Langmuir layer was formed by lauric acid molecules that can be compressed into an untilted condensed phase. A majority of the nanoparticles are attached to the Langmuir film integrating lauric acid residue on their surface into the Langmuir film. Hence, the particles at the liquid-gas interface can be identified as so-called Janus beads, which are amphiphilic solids having two sides with different functionality.
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    Subsurface influence on the structure of protein adsorbates as revealed by in situ X-ray reflectivity
    (2012-05-22)
    Hähl, Hendrik
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    Evers, Florian
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    Grandthyll, Samuel
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    Paulus, Michael
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    Sternemann, Christian
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    Loskill, Peter
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    Lessel, Matthias
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    Hüsecken, Anne K
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    Brenner, Thorsten
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    Tolan, Metin  
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    Jacobs, Karin
    The adsorption process of proteins to surfaces is governed by the mutual interactions among proteins, the solution, and the substrate. Interactions arising from the substrate are usually attributed to the uppermost atomic layer. This actual surface defines the surface chemistry and hence steric and electrostatic interactions. For a comprehensive understanding, however, the interactions arising from the bulk material also have to be considered. Our protein adsorption experiments with globular proteins (α-amylase, bovine serum albumin, and lysozyme) clearly reveal the influence of the subsurface material via van der Waals forces. Here, a set of functionalized silicon wafers enables a distinction between the effects of surface chemistry and the subsurface composition of the substrate. Whereas the surface chemistry controls whether the individual proteins are denatured, the strength of the van der Waals forces affects the final layer density and hence the adsorbed amount of proteins. The results imply that van der Waals forces mainly influence surface processes, which govern the structure formation of the protein adsorbates, such as surface diffusion and spreading.

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